Waxymulgap

Peralta and Spooner, aligned GBSSI gene sequence data, tomatoes and outgroups                                                        
 
Species/Accessions 0        10        20        30        40 50       60        70        80        90        100      110       120       130       140        150      160       170       180       190        200      210       220       230       240        250      260       270       280       290        300      310       320       330       340        350      360       370       380       390        400      410       420       430       440 450      460       470       480       490        500      510       520       530       540 550      560       570       580       590 600      610       620       630       640 650      660       670       680       690 700      710       720       730       740 750      760       770       780       790 800      810       820       830       840 850      860       870       880       890 900      910       920       930       940 950      960       970       980       990 1000     1010      1020      1030      1040      1050     1060      1070      1080      1090 1100     1110      1120      1130      1140 1150     1160      1170      1180      1190 1200     1210      1220      1230      1240 1250     1260      1270      1280      1290 1300     1310      1320     1330       1340 1350     1360      1370      1380
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S. tbr GGACTACCACCAGCCCTTGCAgtaag------tctttcatttggttacct actcat---tcattactta----------------ttttgtttagttagt ttctactgcatca---------------------------gtcttttt-- -------------------------atcattt-agGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCGGTTGAGgtacatcttccta--------------------- ----ttttgatacggta---caata--ttgttcccttacatttcctgatt caagaatgtgatccgctactttatctgcagGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGTTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAgtaagtaagcat----attat gattat------gaatcc--------gtcctgagggatac---------- ----gcagaa-cagg---tcatttt-gaatatctttt-----aactctta ctggtgcttttactcttttaagGTTTGGGGCAAAACTGGTTCAAAAATCT ATGGCCCCAAAGCTGGACTAGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAgtaagtta----gttacttgttata----ctgttgtct tgattttt---------atgtggcattt--------gtctttaatcgttt ttttaaccttgttttctcag----------GCAGCCCTAGAGGCACCTAA AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGgtaatt aacacatcctagtttcagaaaactccttag---------tatatcattgt aggtaatcatctttattttgcctattcctgcagGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTCATTCCTTGCTACTTGAAATCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGgtaaaatttctttgta ttcacttgat-tgcgctttaccctgcaaatcagtaaggttgta-ttaata aatgataaatttcacattgcctccagGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGgtatgtattt--aa tgcttgaaatcagaccaccaacttttgaagctcttttgatgctagtaaat tgagtttt---aaaaattttgcagATATGAGAAG
S. mur Anderson 844 GGACTACCACCAGATCTCGCAGTAAGTATCCGTCTTTCATTTCGTTAC-- ---------TCATTA-------------------TTTTTGTTT----AGT TTGTACTGCATCA---------CTCTGGAACTCTTCACTTATCTTTTT-- --------------AC---TTGATTATCATGT-AGGCACGCGGACATCGG GTAATGACAATATCCCCCCGTTATGATCAATACAAAGATGCTTGGGATAC TAGCGTTGCGGTTGAGGTAC----TTCTATC---------------TTAA CTACTTATGATACAGTA-----AT--------CTCTTCCATTTCCTGATT CAAGAGTGTGATCC-CTACTTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATGGTTCGTTTCTTTCACTGTTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATCTTCTTGGAGAAAGTAAG----CAT----ATTAT ------------GAATCCTTAGAGAGATCCTGAGGGATACTACAATGTTA ATACGCASAAA-ACG---TCATTTT-AAATTTCTTTT-----AACTCT-A CTGCTGCTTT-ACCCTT-TAAGGTTTGGGGCAAAACTGGTTCAAAAATCT ATGGCCCCAAAGCTGGACWAGATTATTTGGACAATGAACTTAGGTTCAGC TTGATGTGTCAAGTAAGTTACTTT--------------------TTGTCT YGATTTT----------ATGTGGCATTTTACTTTT-GTCTTTAACCGT-- ----------GTTTTCTTTGTCACTCTCAGGCAGCCCTAGAGGCACCTAG AGTTCTGAATTTGAACTGTAGCAAATACTTCTCAGGACCATATGGTAA-- --CACATCCCAGTTTCAGAAAACTCCTTCGCAATCATAGTATATCATTGT AGGTAATCATCTTTATTTTGCTTATCTCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTCATTCCCTGCTACTTGAAGTCAAT GTACCAGTCTAGAGGAATCTATTTGAATGCCAAGGTAAAATCTCTTTGTA TTCACTTGATTTGCACTTTACCCTGCAAATCAACAAGGTTGTACTTATAT AGTGATAAATTTCACATTGCCTCCAGGTTGCTTTGGGCATCCACAACATT GCGTACCAAGGACGATTTTCTTTGTCCGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGAATTW--AA TGCTTGAAATCAGACCACCAACTTTTGAAGCTCTTTTGATGCTAGTAAAT TGAGTTTT---GTACATTTTGCAGATATGGAAAG
S. etb PI 498311 GGACATCCACCAGCCCTTGCAGTAAG------TCTTTCATTTGGTTACCT ACTCAT---TCATTA--------------------TTTTGTTT----AGT TTCTACTGCATCA-----------------GTCTTCACTTGTCTTTTT-- --------------AC---TTGATTATCATTT-AGGCCCGTGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCGGTTGAGGTAC----TCCTATA------------------- ------TTGATACA-----ACAATATAT----CTCGTCCATTTCCTGATT CAAGAATGTGATCC-CTACTTTATCTGCAGGTCAAAGTTGGAGATAGCAT TGAAATTGTTCGTTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAG----CAT----ATTAT GATTAT------GAATCCTTAGAGAGGTCCTGAAGGATACTACAATGTGA ATACGCAGAA-CAGG---TCATTTT-GATTCTCTTTTT----AACTCT-A CTGGTGCTTTTACTCTTATAAGGTTTGGGGCAAAACTGGTTCAAAAATCT ATGGCCCCAAAGCTGGACTAGATTATTTGGACAATGAACTTAGGTTCAGC TTGTTGTGTAAAGTAAGTTACTT-GTTGTA-----------CTGTTGTCT TGATTTT----------ATGTGGCATTTTACTTTT-GTCTTTAATCGTTT TTTAAACCTTGTTTTCTTTGTCACTCTCAGGCAGCCCTAGAGGCACCTAG AGTTCTAAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAGAAAACTCCTTAGCAATCATAGTATATCATTGT AGGTAATCATCTTTATTTTGCCTATTTCTGTAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTCATTCCCTGCTACTTGAAGTCAAT GTACCAGTCTAGAGGAATCTATTTGAATGCCAAGGTAAAATCTCTTTGTA TTCACTTGATTTGCACTTTACCCTGCAAATCAATAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCGTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGTTTGAAATCAGACCACCAACTTTTGAAGCTCTTTTGATGCTAGTAAAT TGAGTTTTT---AAAATTTTGCAGATATGAAAAG
S. pal PI 218228 ??????????????????GCAGTAAG------TCTTTCATTTGGTTACCT ACTCAT---TCATTA--------------------TTTTGTTT----AGT TTCTACCGCATCA-----------------GTCTTCACTTGTCTTTTT-- --------------AC---TTGATTATCATTT-AGGCCCGTGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCGGTTGAGGTAC----TCCTATA------------------- ------TTGATACA-----ACAATATAT----CTCGTCCATTTCCTGATT CCAGAATGTGATCC-CTACTTTATCTGCAGGTCAAAGTTGGAGATAGCAT TGAAATTGTTCGTTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCCTGGAGAAAGTAAG----CAT----ATTAT GATTAT------GAATCCCTAGAGAGGTCCTGAAGGATACTACAATGTGA ATACGCAGAA-CAGG---TCATTTT-GATTCTCTTTTT----AACTCT-A CTGGTGCTTTTACTCTTATAAGGTTTGGGGCAAAACTGGTTCAAAAATCT ATGGCCCCAAAGCTGGACTAGATTATTTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTGTA-----------CTGTTGTCT TGATTTT----------ATGTGGCATTTTACTTTT-GTCTTTAATCGTTT TTTAAACCTTGTTTTCTTTGTCACTCTCAGGCAGCCCTAGAGGCACCTAG AGTTCTAAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAGAAAACTCCTTAGCAATCATAGTATATCTTTGT AGGTAATCATCTTTATTTTGCCTATTTCTGTAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTCATTCCCTGCTACTTGAAGTCAAT GTACCAGTCTAGAGGAATCTATTTGAATGCCAAGGTAAAATCTCTTTGTA TTCACTTGATTTGCACTTTACCCTGCAAATCAATAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCGTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGTTTGAAATCAGACCACCAACTTTTGAAGCTCTTTTGATGCTAGTAAAT TGAGTTTTT---AAAATTTTGCAGATATGAAAAG
S. tbr GGACTGCCACCAGCCCTTGCAGTAAG------TCTTTCATTTGGTTACCT ACTCAT---TCATTACTTA----------------TTTTGTTTAGTTAGT TTCTACTGCATCA---------------------------GTCTTTTT-- -------------------------ATCATTT-AGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCGGTTGAGGTACATCTTCCTA--------------------- ----TTTTGATACGGTA---CAATA--TTGTTCCCTTACATTTCCTGATT CAAGAATGTGATCCGCTACTTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGTTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGTAAGCAT----ATTAT GATTAT------GAATCC--------GTCCTGAGGGATAC---------- ----GCAGAA-CAGG---TCATTTT-GAATATCTTTT-----AACTCTTA CTGGTGCTTTTACTCTTTTAAGGTTTGGGGCAAAACTGGTTCAAAAATCT ATGGCCCCAAAGCTGGACTAGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTA----GTTACTTGTTATA----CTGTTGTCT TGATTTTT---------ATGTGGCATTT--------GTCTTTAATCGTTT TTTTAACCTTGTTTTCTCAG----------GCAGCCCTAGAGGCACCTAA AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAATT AACACATCCTAGTTTCAGAAAACTCCTTAG---------TATATCATTGT AGGTAATCATCTTTATTTTGCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTCATTCCTTGCTACTTGAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTCTTTGTA TTCACTTGATT-GCGCTTTACCCTGCAAATCAGTAAGGTTGTA-TTAATA AATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTTGAAGCTCTTTTGATGCTTGTAAAT TGAGTTTT---AAAAATTTTCGAGATATGAGAAG
S. blb PI 347757 GGACTACCACCAGCCCTTGCAGTAAG------TCTTTCATTTGGTTGCCT ACTCAT---TCATTACTTA----------------TTTTGTTT----AGT TTCTACTGCATCA---------------------------GTCTTTTT-- -------------------------ATCATTT-AGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCGGTTGAGGTACATCTTCCTATA------------------- ------TTGATACA-----ACAACA--TTGTTCTCTTCCATTTCCTGATT CAAGAATGTGATCCGCTACTTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGTTTCTTTCACTGCTACAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAGAGTAAG----CAT----ATTAT GATTAT------GAATCC--------GTCCTGAGGGATACTACAATGTGA ATACGCA------------------------TCCTTT-----AACTCT-A CTGGTGCTTTTACTCTTTTAAGGTTTGGGGCAAAACTGGTTCAAAAATCT ATGGCCCCAAAGCTGGACTAGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTA----GTTACTTGTTATA----CTGTTGTCT TGATTT-------------GTGGCATTTTACTTTTTGTCTTTAATCGTTT TTTTAACCTTGTTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAGAAAACTCCTTAG---------TATATCATTGT AGGTAATCATCTTTAGTTTGCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTCATTCCCTGCTACTTGAAGTCAAT GTACCAGTCTAGAGGAATCTATTTGAATGCCAAGGTAAAATCTCTTTGTA TTCACTTGATA-GCACTTTACCCTGCAAATCAATCAGGTTGTA-TTAATA TATGATAAATTTCACATTGTCTCTAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGAYGGGTATGTATTT--AA TGCTTCAAATCAGACCACCAACTTTTGAAGCTCTTTTGATACTAGAAAAT TGAGTTTTT---AAAATTTTGCAGATATGAAAAG
S. jam PI 458424 ????????ACCAGCCCTTGCAGTAAG------TCTTTCATTTGGTTACCT ACTCAT---TCATTACTTA----------------TTTTGTTT----AGT TTCTACTGCATCA---------------------------GTCTTTTT-- -------------------------ATCATTT-AGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCGGTTGAGGTACATCTTCCTATA------------------- ------TTGATACA-----ACAATA--TTGTTCTCTTCCATTTCCTGATT CAAGAATGTGATCCGCTACTTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGTTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAG----CAT----ATTAT GATTAT------GAATCC--------GTCCTGAGGGATACTACAATGTGA ATACGCA------------------------TCTTTT-----AACTCT-A CTGGTGCTTTTACTCTTTTAAGGTTTGGGGCAAAACTGCTTCAAAAATCT ATGGCCCCAAAGCTGGACTAGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTA----GTTACTTGTTATATATACGGTTGTCT TGATTTTT---------ATGTGGCATTTTACTTTT-GTCTTTAATCGTTT TTTTAACCTTGTTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAGTAAACTCCTTAG---------TATATCATTGT AGGTAATCATCTTTATTTTGCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTCATTCCCTGCTACTTGAAGTCAAT GTACCAGTCTAGAGGAATCTATTTGAATGCCAAGGTAAAATCTCTTTGTA TTCACTTGATT-GCACTTTACCCTGCAAATCAATAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCTAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGACGGGTATGTATTT--AA TGCTTCAAATCAGACCACCAACTTTTGAAGCTCTTTTGATACTAGTAAAT TGAGTTTT--GGCAAATTTTGCAGATCTGCAAAG
S. jgl LA 2134 GGACTACCACCAGCCCTTGCAGTAAG------TCTTTCA----------- ------------------------TTTTGTTTTG-TTTTGTTT------- --CTACTCCACCA---------------------------GTCTTTTTT- ----------AATTAC---TTGATTATCATTT-AGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCGTTGAGGTACTCCTTCCTATA------------------- ------TTCATACA-----ACAATATAT----CTCTTCCATTTCCTGATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGTTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAG----CATATATATTAT GATTAT-------------------------------------------- -------GAA-TAGG---TCATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTTACTCTTTTAAGGTTTGGGGCAAAACTGGTTCAAAAATCT ATGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCCTTTTACTTTC-GTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAG---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCTTGCAGGAGAGGATGTTATCTTC ATTGCCAATGATTGGCACACAGCTCTCATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATATCTTTGTA TACACTTGATT-GCACTTTACCCTGCAAATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCGGACTTCCCTCTTCTCAATCTTCC TGATAAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TGAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. jgl LA 2788 GGACTACCACCAGCCCTTGCAGTAAG------TCTTTCA----------- -------------------TTTTGTTTTGTTTTG-TTTTGTTT------- --CTACTCCACCA---------------------------GTCTTTTTT- ----------AATTAC---TTGATTATCATTT-AGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCGTTGAGGTACTCCTTCCTATA------------------- ------TTCATACA-----ACAATATAT----CTCTTCCATTTCCTGATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGTTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAG----CATATATATTAT GATTAT-------------------------------------------- -------GAA-TAGG---TCATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTTACTCTTTTAAGGTTTGGGGCAAAACTGGTTCAAAAATCT ATGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCCTTTTACTTTC-GTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAG---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCTTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTCATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATATCTTTGTA TACACTTGATT-GCACTTTACCCTGCAAATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCGGACTTCCCTCTTCTCAATCTTCC TGATAAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TGAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. och LA 2682 GGACTACCACCAGCCCTTGCAGTAAG------TCTTTCA----------- -------------------TTTTGTTTTGTTTTG-TTTTGTTT------- --CTACTCCACCA---------------------------GTCTTTTTT- ----------AATTAC---TTGATTATCATTT-AGGCCCGCGGACACCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCGTTGAGGTACTCCTTCCTATA------------------- ------TTCATACA-----ACAATATAT----CTCTTCCATTTCCTGATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGTTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAG----CATATATATTAT GATTAT-------------------------------------------- -------GAA-TAGG---TCATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTTACTCTTTTAAGGTTTGGGGCAAAACTGGTTCAAAAATCT ATGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTC-GTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAG---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCTTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTCATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATATCTTTGTA TACACTTAATT-GCACTTTACCCTGCAAATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCGGACTTCCCTCTTCTCAATCTTCC TGATAAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TGAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. och LA 3650 GGACTACCACCAGCCCTTGCAGTAAG------TCTTTCA----------- -------------------TTTTGTTTTGTTTTG-TTTTGTTT------- --CTACTCCACCA---------------------------GTCTTTTTT- ----------AATTAC---TTGATTATCATTT-AGGCCCGCGGACACCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCGTTGAGGTACTCCTTCCTATA------------------- ------TTCATACA-----ACAATATAT----CTCTTCCATTTCCTGATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGTTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAG----CATATATATTAT GATTAT-------------------------------------------- -------GAA-TAGG---TCATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTTACTCTTTTAAGGTTTGGGGCAAAACTGGTTCAAAAATCT ATGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTC-GTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAG---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCTTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTCATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATATCTTTGTA TACACTTAATT-GCACTTTACCCTGCAAATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCGGACTTCCCTCTTCTCAATCTTCC TGATAAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TGAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. lyc LA 1964 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTA-------------TTTTTG-TTTTGTTT------- -TCTACTGCACCA---------------------------GTCTTTTAAT TTTTTATTATTATTA----TT-ATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCACCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCGTTGAGGTACTCCTTCCTATATATATATATATATA----- ------TTCAYACA-TACAACAATATAT----CTCTTCCATTTCCTGA-- -----------TCCCCTACTTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATGGTTCGTTTCTTTCACTGCTATAAACGTGGGGTWGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAWGTAAGCAAGCAT---GATTAT GATTAT-------------------------------------------- -------GAAATAGGACCTCMTTAS-CAACATCTTTAATTTTAACTCT-A CTGCTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAGTCT ATGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTTTGTTATA-----------CTGTTGTCT TGATCTTTTTCTTATATATGTGCCATT---------GTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTTAG---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTCATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTCTTTGTA TACG---------GACTTTACCCTGCAAATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TGAGTTTTTT-AAAAATCTTGCAGATATGAGAAA
S. lyc LA 1990 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTA-------------TTTTTG-TTTTGTTT------- -TCTACTGTACCA---------------------------GTCTTTT--- TTTT----ATTATTA----TT-ATTATCATTTTAGGCCCGMGGACATCSR GTAATGACAATATCACCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCGTTGAGGTACTCCTTCCTATATATATATATATA------- ------TTCATACA-TACAACAATATAT----CTCTTCCATTTCCTGA-- -----------TCCCCTACTTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATGGTTCGTTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT---GATTAT GATTATGATTAT-------------------------------------- -------GAAATAGGACCTCATTAG-CAACATCTTTAATTTTAACTCT-A CTGATGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAGTCT ATGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTTTGTTATA-----------CTGTTGTCT TGATTTTTTTCTTATATATGTGCCATT---------GTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAG---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTCATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTCTTTGTA TACA---------CACTTTACCCTGCAAATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTCCTTGCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------TATGCTAGTAAAT TGAGTTTTTTTAAAAATCTTGCAGATATGAGAAA
S. sit LA 2876 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTA-------------TTTTTG-TTTTGTTT------- -TCTACTGCACCA---------------------------GTCTTTTTTT TTT-------AATTA----TT-ATTAWYATTTTAGGCCCGCGGACATCGG GTAATGACAATATCACCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCGTTGAGGTACTCCTTCCTATATATATATATATA------- ------TTCATACA-TACAACAATATAT----CTCTTCCATTTCCTGA-- -----------TCCCCTACTTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATGGTTCGTTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT---GATTAT GATTAT-------------------------------------------- -------GAAATAGGACCTCATTAT-CAACATCTTTAATTTTAACTCT-A CTGCTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAGTCT ATGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTTTGTTATA-----------CTGTTGTCT TGATTTTTTTCTTATATATGTGCCATT---------GTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAG---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTCATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTCTTTGTA TACA---------CACTTTACCCTGCAAATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TGAGTTTTTT-AAAAATCTTGCAGATATGAGAAA
S. sit LA 2878 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTA-------------TTTTTG-TTTTGTTT------- -TCTACTGCACCA---------------------------GTCTTTTTTT TTT-------AATTA----TT-ATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCACCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCGTTGAGGTACTCCTTCCTATATATATATATATA------- ------TTCATACA-TACAACAATATAT----CTCTTCCATTTCCTGA-- -----------TCCCCTACTTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATGGTTCGTTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT---GATTAT GATTAT-------------------------------------------- -------GAAATAGGACCTCATTAT-CAACATCTTTAATTTTAACTCT-A CTGCTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAGTCT ATGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTTTGTTATA-----------CTGTTGTCT TGATTTTTTTCTTATATATGTGCCATT---------GTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAG---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTCATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTCTTTGTA TACA---------CACTTTACCCTGCAAATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TGAGTTTTTT-AAAAATCTTGCAGATATGAGAAA
S. lypc LA 1673 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAACAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTCTT---AAAATTTTGCAGATATGAGAAG
S. lypc LA 1334 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAACAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAAYGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTCTT---AAAATTTTGCAGATATGAGAAA
S. lypc LA 1226 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAACAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAAYGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTYTW---AAAWTTTTGCAGATATGAGAAA
S. lyp MS GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAACAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TYAGTTCTT---AAAATTTTGCAGATATGAGATA
S. pim LA 722 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAACAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTTGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTCTT---AAAATTTTGCAGATATGAGAAA
S. pim LA 1237 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAACAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTCTT---AAAATTTTGCAGATATGAGAAA
S. pim LA 1581 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAACAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGMTAGTAAAT TCAGTTCTT---AAAATTTTGCAGATATGAGAAA
S. pim LA 2184 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAACAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTCTT---AAAATTTTGCAGATATGAGAAA
S. chs LA 166 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAACAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTCTT---AAAATTTTGCAGATATGAGAAA
S. chsm LA 317 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAACAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTCTT---AACATTTTGCAGATATGAGAAA
S. chs LA 1450 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAACAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCGTATGGTAA-- --CACATCCTAGTTTCGC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTCTT---AAAATTTTGCAGATATGAGAAA
S. neo LA 247 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAAAATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGA-TTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAATTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGACGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATWTGAGAAA
S. neo LA 1326 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAAAWTAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGA-TTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. neo LA 2200 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAAAATAT-------------------ATT CAAGAATG-----------TYTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGA-TTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. chm LA 1306 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGA-TTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. chm LA 1327 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAASAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGA-TTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAAGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. chm LA 2663 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-ATTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGA-TTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGTTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 2185 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAAAATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAAYCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATRTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 2172 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAAAATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 2163 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAACAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA CATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTCTT---AAAATTTTGCAGATATGAGAAA
S. per LA 2157 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTAGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTMATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA CATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTCTT---AAAATTTTGCAGATATGAGAAA
S. per LA 392 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATACATATATA--------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAASAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGYGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTWTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTCTT---AAAATTTTGCAGATATGAGAAA
S. per LA 1351 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATACATATATA--------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAACAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATYTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGARTTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAY--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATT-CACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTCTT---AAAATTTTGCAGATATGAGAAA
S. per LA 441 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAAATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATACATATATA--------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAACAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATT-CACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATYTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 1609 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTWGTKT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATACATATATA--------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----AYTAT GATTAT-------------------------------------------- -------CAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA CATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTCTT---AAAATTTTGCAGATATGAGAAA
S. perh LA 2152-1 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATACATATATA--------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTTTAAACGTGGGGTTGATCGCGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATT-CACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTCTT---AAAATTTTGCAGATATGAGAAA
S. perh LA 2152-3 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAACAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTCTT---AAAATTTTGCAGATATGAGAAA
S. perh LA 2548 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTWCAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAACAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATYTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAY--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTCTT---AAAATTTTGCAGATATGAGAAA
S. per LA 1396 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TWCAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACWCWATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATRTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTCTT---AATATTTTGCAGATATGAGAAA
S. per LA 378 ????????ACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAACAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 1984 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAACAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTACTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATRTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTYTT---AAAATTTTGCAGATATGAGAAA
S. per LA 2328 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------A--T ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAAAATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTWACTTTTTGTCTTTAATCGTTT TCTCAACGTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATKT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 1626 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAAWATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------CAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTCAACGTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCSTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCAAC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 1556-1 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TC------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTCTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAAATTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 444 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTACTGCACCAATTACACCA---------------------------- -----------ATTACAGCTTGATTATCATTT-AGGCCCGCGGACATAGG GTAATGACAATATCCCMCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGWTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATKAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTCTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATACTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGACGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTTTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAATATT GCCTACCAAGGGCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTC---AAAATTTTGCAGATATGAGAAA
S. per LA 448 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATMCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTKCAGGAGASGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAAWTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAAYA TATGATAAATTTCACWTTRCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 1336-2 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTCTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 110-1 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATA--------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTCGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGCCATTTTACTTTTTGTCTTTAATCGTTT TCTTTACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGGGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AATATTTTGCAGATATGAGAAA
S. perg LA 1283 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTACTGCACCA------------------------------------- -----------ATTACAGCTTGATTATCATTT-AGGCCCGCGGACATAGG GTAATGACAATATCCCMCCGTTATGACCAATACAAAKATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATATATATATA------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CMTTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTCTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCGCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATACTAGTTTCAC---------TAGCARCCATAGTATATCATTGT AGGTAATCATT--------GCCTATTCCTGCAGGAGACGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTTTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAATATT GCCTACCAAGGGCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAMT TCAGTTTTC---AAAATTTTGCAGATATGAGAAA
S. per LA 1913 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATACATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCMCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATATATATATA------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTCGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ACTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGCCATTTTACTTTTTGTCTTTAATCGTTT TCTTTACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGGGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AATATTTTGCAGATATGAGAAA
S. per LA 107 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTACTGCACCA------------------------------------- -----------ATTACAGCTTGATTATCATTT-AGGCCCGCGGACATAGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATATATATATA------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTTT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTCTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACTTACTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGACGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTTTA TACACTTGATT-GTACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAATATT GCCTACCAAGGGCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTC---AAAATTTTGCAGATATGAGAAA
S. per LA 1305 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCMCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATATATATA--------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGKTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATACTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTKCAGGAGACGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCTAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAACA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTYAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 1910 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCMCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATATA------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 1973 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATATA------------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATMCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTKCAGGAGASGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCYAAGGTAAAAWTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAAYA TATGATAAATTTCACWTTRCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCMGATTTTCTTTCTCTGACTTCCCTCTTCTYAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 110-2 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATA----------------TAA ATACTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTCGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGCCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTACTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 153 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATA----------------TAA ATACTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTCGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAAGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 111-1 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATA----------------TAA ATACTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTCGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 111-3 GGACTACCACCAGCCCTTGTAGGAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATA----------------TAA ATACTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGCGGGGTTGATCGTGTTT TTGTCGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 1379 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATA----------------TAA ATACTTTTCATACA-TACGACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTCGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCSAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATRTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 1274 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATA----------------TAA ATACTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTCTGTCTTTAATCGTTT TCTCAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTGCCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 370 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATA----------------TAA ATACTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT WTGTYGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTYTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAARGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 103 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCMCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATA----------------TAA ATACTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTCGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAAGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 1331 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCMCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATA----------------TAA ATACTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGSCATTTTACTTTTTGTCTTTAATCGTTT TCTTWACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 1937 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCMCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATA----------------TAA ATACTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTYGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 1336-1 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATA----------------TAA ATACTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTCGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCATGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 451 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATA----------------TAA ATACTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTCGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATKAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 3156 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATA----------------TAA ATACTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTYGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTYTTCTCAATCTTCC TGATGAATTCAGGGGTTCTWTTGATTTYATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 1954 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATA----------------TAA ATACTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTCGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA WACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGAWTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 2964 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATA----------------TAA ATACTTTTCATACA-TACAGCAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTCGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTWCTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. per LA 2744 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATA----------------TAA ATACTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTCGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAAGTTGTA-TTAATA TATGATAAATTTCACATTACCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTYTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. chl LA 1963 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTACTGCACCA------------------------------------- -----------ATTACAGCTTGATTATCATTT-AGGCCCGCGGACATAGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATATATATA--------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATACTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTTCAGGAGACGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAACA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. chl LA 2884 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTACTGCACCA------------------------------------- -----------ATTACAGCTTGATTATCATTT-AGGCGCGCGGACATAGG GTAATGACAATATCTCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATATATA----------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTGGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATACTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTTCAGGAGACGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAACA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. chl LA 1930 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATATATATA--------- ---CTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATACTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTTCAGGAGACGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCTAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAACA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTTAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. habg LA 1223 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTACTGCACCA------------------------------------- -----------ATTACAGCTTGATTATCATTT-AGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATATATATATA----TAA ATACTTTTCGTACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTCTCACTGCTATAAACGTGGGGTWGATCGTGTTT TTGTWGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTGAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTTGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTTTTGA TGCTTGAAATCAGACCACCAACTTTT-----------GATGATAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. hab LA 1353 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTACTGCACCA------------------------------------- -----------ATTACAGCTTGATTATCATTT-AGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTCTATATATATATATATATATAA ATACTTTTCGTACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCRGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTYTCACTGCTATAAACGTGGGGTWGATCGTGTTT TTGTWGACCACCCAATGTTTTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTGAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTTTTGA TGCTTGAAATCAGACCACCAACTTTT-----------GATGATTGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. hab LA 1928 GGACTACCACCATCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTACTGCACCA------------------------------------- -----------ATTACAGCTTGATTATCATTT-AGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATATATATATATATA----TAA ATACTTTTCGTACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTYTCACTGCTATAAACGTGGGGTWGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTGAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGYAACCATAGTATATCATTGT AGGTAATCATC--------GCCTATTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTTTTGA TGCTTGAAATCAGACCACCAACTTTT-----------GATGATAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. pen LA 716 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTACGGCACCA------------------------------------- -----------ATTACAGCTTGATTATCATTT-AGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATA----------------TAA ATACTTTTCATACA-TACAACAATATAT---------------------T CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTYTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTGTTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. pen LA 1376 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTAATGCACCA------------------------------------- -----------ATTACAGCTTCATTATCATTTTAGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATA----------------TAA ATACTTTTCATACA-TACAACAATATAT-------------------ATT CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTYGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CRTTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTYAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTRTTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCYGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
S. penp LA 1926 GGACTACCACCAGCCCTTGCAGTAAG------TCTT----------ACCT ACTCATGATTCATTC--------------------TTTTGTTT------- --CTACGGCACCA------------------------------------- -----------ATTACAGCTTGATTATCATTT-AGGCCCGCGGACATCGG GTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATAC TAGCGTTGCCCTTGAGGTACTCCTTCCTATA----------------TAA ATACTTTTCATACA-TACAACAATATAT---------------------T CAAGAATG-----------TTTATCTGCAGGTCAAAGTTGGAGACAGCAT TGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTT TTGTTGACCACCCAATGTTCTTGGAGAAAGTAAGCAAGCAT----ATTAT GATTAT-------------------------------------------- -------GAA-TA------CATTTT-GAACATCTTTT-----AACTCT-A CTGGTGCTTTT--------AAGGTTTGGGGCAAAACTGGTTCAAAAATCT ACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGC TTGTTGTGTCAAGTAAGTTACTT-GTTATA-----------CTGTTGTCT TGGAATTTT--------ATGTGGCATTTTACTTTTTGTCTTTAATCGTTT TCTTAACCTTATTTTCTCAG----------GCAGCCCTAGAGGCACCTAG AGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGTAA-- --CACATCCTAGTTTCAC---------TAGCAACCATAGTATATCATTGT AGGTAATCATC--------GCCTGTTCCTGCAGGAGAGGATGTTCTCTTC ATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAAT GTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTAAAATTTATTTGTA TACACTTGATT-GCACTTTACCCTTCATATCAGTAAGGTTGTA-TTAATA TATGATAAATTTCACATTGCCTCCAGGTCGCTTTCTGCATCCATAACATT GCCTACCAAGGCCGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCC TGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGGTATGTATTT--AA TGCTTGAAATCAGACCACCAACTTTT-----------GATGCTAGTAAAT TCAGTTTTT---AAAATTTTGCAGATATGAGAAA
                                                         
CHARSET waxy_nt=1-1384                                                        
CHARSET waxy_gaps=1385-1404 (see Appendix 2)                                                        
CHARSET exon=1-21 186-266 381-479 623-712 831-894 984-1084 1177-1286 1375-1384                                                        
CHARSET intron=22-185 267-380 480-622 713-830 895-983 1085-1176 1287-1374                                                        

Last Updated on 7/30/01
By American Journal of Botany